Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4841

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
139,512	+		GFF4840	0.20	+0.2
139,567	+		GFF4840	0.25	+0.2
139,655	+		GFF4840	0.32	-0.0
139,656	-		GFF4840	0.32	+0.3
139,864	+		GFF4840	0.51	-0.8
139,864	+		GFF4840	0.51	-0.2
139,865	-		GFF4840	0.51	+0.4
139,866	+		GFF4840	0.51	+0.5
139,867	-		GFF4840	0.51	-0.4
140,038	-		GFF4840	0.66	-0.7
140,043	+		GFF4840	0.66	+1.7
140,199	-		GFF4840	0.80	-0.1
140,287	-		GFF4840	0.88	-0.3
140,398	-				-0.3
140,400	-				-0.6
140,400	-				-0.4
140,456	+				+0.9
140,462	+				+0.2
140,462	+				+0.0
140,462	+				-0.1
140,463	-				+0.1
140,463	-				+1.4
140,529	-				-0.7
140,553	+				+1.0
140,553	+				-0.6
140,554	-				+0.4
140,554	-				+0.1
140,554	-				+0.0
140,557	+				+0.1
140,590	-				+0.0
140,877	+		GFF4841	0.28	+0.3
140,945	+		GFF4841	0.33	+0.2
140,978	+		GFF4841	0.35	+0.1
141,094	+		GFF4841	0.44	-1.5
141,094	+		GFF4841	0.44	+0.1
141,099	-		GFF4841	0.44	+0.3
141,525	-		GFF4841	0.76	+0.8
141,544	-		GFF4841	0.77	+0.2
141,710	+		GFF4841	0.90	+0.3
141,710	+		GFF4841	0.90	-0.1
141,716	+				-0.0
141,719	+				+1.2
141,776	+				-1.0
141,777	-				+0.4
141,777	-				+0.9
141,777	-				+0.4
141,831	-				-0.1
141,839	+				+0.4
141,840	-				+0.4
141,845	+				+0.1
141,857	+				+0.0
142,118	-		GFF4842	0.19	-0.5
142,118	-		GFF4842	0.19	-0.6
142,157	-		GFF4842	0.22	-0.0
142,343	-		GFF4842	0.36	+0.1
142,445	+		GFF4842	0.43	-0.6
142,445	+		GFF4842	0.43	-0.6
142,445	+		GFF4842	0.43	+0.2
142,446	-		GFF4842	0.43	-0.2
142,446	-		GFF4842	0.43	+0.4
142,516	+		GFF4842	0.48	-0.3
142,752	+		GFF4842	0.66	+0.7
142,753	-		GFF4842	0.66	+0.0
142,826	-		GFF4842	0.72	+0.1