Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4787

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
94,051	-		GFF4786	0.35	-1.0
94,076	+		GFF4786	0.36	+0.2
94,076	+		GFF4786	0.36	+0.3
94,191	-		GFF4786	0.44	+0.6
94,271	+		GFF4786	0.50	+0.0
94,350	-		GFF4786	0.55	+0.7
94,584	+		GFF4786	0.72	+0.0
94,584	+		GFF4786	0.72	+0.4
94,585	-		GFF4786	0.72	-1.9
94,585	-		GFF4786	0.72	+0.3
94,795	+		GFF4786	0.87	+0.6
94,795	+		GFF4786	0.87	+0.2
94,905	+				-0.5
94,906	-				+0.4
94,980	-				-0.3
95,026	-		GFF4787	0.13	+0.3
95,069	+		GFF4787	0.31	+0.1
95,069	+		GFF4787	0.31	+0.9
95,070	-		GFF4787	0.31	+0.1
95,070	-		GFF4787	0.31	+0.1
95,071	+		GFF4787	0.32	-0.1
95,093	-		GFF4787	0.41	+0.1
95,095	-		GFF4787	0.42	-0.0
95,095	-		GFF4787	0.42	-0.6
95,095	-		GFF4787	0.42	+0.4
95,275	-				+0.2
95,605	-		GFF4788	0.33	+1.8
95,637	-		GFF4788	0.36	-2.2
95,637	-		GFF4788	0.36	-0.6
95,709	-		GFF4788	0.44	-0.7
95,740	-		GFF4788	0.47	-0.6
95,740	-		GFF4788	0.47	-0.3
95,740	-		GFF4788	0.47	-0.1
95,837	-		GFF4788	0.56	+0.6