Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4780

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
87,713	+				-0.1
87,790	+				+0.1
87,791	-				-0.1
87,791	-				+0.0
87,800	+				+0.7
87,805	+				+0.0
87,805	+				-0.4
87,805	+				-0.2
87,871	-				+0.3
87,899	+		GFF4779	0.11	+0.5
87,931	-		GFF4779	0.15	+0.4
87,984	-		GFF4779	0.22	-0.1
87,984	-		GFF4779	0.22	-1.1
88,134	+		GFF4779	0.41	+0.3
88,134	+		GFF4779	0.41	-0.9
88,175	-		GFF4779	0.46	+0.1
88,436	-		GFF4779	0.80	-0.5
88,446	-		GFF4779	0.81	-0.0
88,541	-				-0.6
88,629	+				-0.1
88,695	-		GFF4780	0.15	-0.3
88,752	+		GFF4780	0.24	+0.3
88,820	-		GFF4780	0.35	+0.1
88,820	-		GFF4780	0.35	-1.5
88,944	+		GFF4780	0.54	-0.3
88,945	-		GFF4780	0.55	-0.8
88,945	-		GFF4780	0.55	-0.6
89,003	+		GFF4780	0.64	-0.2
89,511	+		GFF4781	0.22	-0.6
89,512	-		GFF4781	0.22	-0.5
90,111	+		GFF4781	0.70	+0.4
90,112	-		GFF4781	0.70	+0.1
90,112	-		GFF4781	0.70	+0.2