Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4761
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
66,777 | - | GFF4760 | 0.24 | -0.2 | |
66,855 | - | GFF4760 | 0.30 | -0.7 | |
67,049 | + | GFF4760 | 0.45 | -0.1 | |
67,161 | + | GFF4760 | 0.54 | +0.7 | |
67,162 | - | GFF4760 | 0.54 | +0.0 | |
67,319 | - | GFF4760 | 0.66 | -0.8 | |
67,380 | - | GFF4760 | 0.71 | +0.2 | |
67,527 | - | GFF4760 | 0.82 | -0.7 | |
67,594 | + | GFF4760 | 0.88 | +0.0 | |
67,595 | - | GFF4760 | 0.88 | -0.4 | |
67,696 | - | -0.2 | |||
67,730 | + | -0.3 | |||
67,731 | - | -0.2 | |||
67,860 | - | GFF4761 | 0.26 | -0.6 | |
67,962 | + | GFF4761 | 0.51 | -0.5 | |
68,005 | - | GFF4761 | 0.62 | +0.3 | |
68,160 | - | -0.1 | |||
68,305 | + | -1.8 | |||
68,336 | + | +0.6 | |||
68,350 | + | +0.5 | |||
68,533 | + | GFF4762 | 0.17 | +0.1 | |
68,656 | + | GFF4762 | 0.23 | +0.8 | |
69,089 | - | GFF4762 | 0.44 | -0.4 | |
69,150 | - | GFF4762 | 0.47 | -0.5 |
Or see this region's nucleotide sequence