Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4759
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
65,164 | - | GFF4758 | 0.13 | +0.0 | |
65,219 | + | GFF4758 | 0.19 | -0.1 | |
65,247 | - | GFF4758 | 0.22 | -0.9 | |
65,259 | + | GFF4758 | 0.23 | -0.7 | |
65,260 | - | GFF4758 | 0.23 | +0.1 | |
65,415 | + | GFF4758 | 0.38 | +0.3 | |
65,425 | - | GFF4758 | 0.39 | +0.1 | |
65,526 | + | GFF4758 | 0.49 | -0.1 | |
65,551 | - | GFF4758 | 0.52 | +0.2 | |
65,585 | - | GFF4758 | 0.55 | -1.1 | |
65,639 | - | GFF4758 | 0.60 | -0.7 | |
66,092 | - | GFF4759 | 0.12 | -0.9 | |
66,268 | - | GFF4759 | 0.52 | -0.1 | |
66,456 | + | -0.4 | |||
66,457 | - | +0.0 | |||
66,716 | - | GFF4760 | 0.20 | -0.3 | |
66,777 | - | GFF4760 | 0.24 | -0.2 | |
66,855 | - | GFF4760 | 0.30 | -0.7 | |
67,049 | + | GFF4760 | 0.45 | -0.1 | |
67,161 | + | GFF4760 | 0.54 | +0.7 | |
67,162 | - | GFF4760 | 0.54 | +0.0 | |
67,319 | - | GFF4760 | 0.66 | -0.8 | |
67,380 | - | GFF4760 | 0.71 | +0.2 |
Or see this region's nucleotide sequence