Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4575
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 362,039 | - | GFF4575 | 0.11 | -2.9 | |
| 362,237 | - | GFF4575 | 0.33 | -2.1 | |
| 362,237 | - | GFF4575 | 0.33 | -2.0 | |
| 362,364 | - | GFF4575 | 0.48 | -1.9 | |
| 362,607 | - | GFF4575 | 0.75 | -1.9 | |
| 362,607 | - | GFF4575 | 0.75 | -3.6 | |
| 362,853 | - | -0.2 | |||
| 362,871 | - | -0.8 | |||
| 362,871 | - | +0.5 | |||
| 362,873 | - | -0.1 | |||
| 362,924 | - | -0.1 | |||
| 363,006 | - | -0.9 | |||
| 363,796 | - | GFF4577 | 0.33 | -1.0 | |
| 363,796 | - | GFF4577 | 0.33 | -0.2 |
Or see this region's nucleotide sequence