Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF4255 and GFF4256 overlap by 1 nucleotides GFF4256 and GFF4257 are separated by 205 nucleotides
GFF4255 - putative Cytochrome bd2, subunit II, at 40,378 to 41,388
GFF4255
GFF4256 - putative Cytochrome bd2, subunit II, at 41,388 to 41,519
GFF4256
GFF4257 - Transcriptional regulator, AraC family, at 41,725 to 42,729
GFF4257
Position (kb) 41
42 Strain fitness (log2 ratio) -1
0
1 at 40.411 kb on - strand at 40.435 kb on + strand at 40.435 kb on + strand at 40.435 kb on + strand at 40.435 kb on + strand at 40.436 kb on - strand at 40.436 kb on - strand at 40.436 kb on - strand at 40.603 kb on + strand, within GFF4255 at 40.604 kb on - strand, within GFF4255 at 40.660 kb on - strand, within GFF4255 at 40.660 kb on - strand, within GFF4255 at 40.888 kb on + strand, within GFF4255 at 40.888 kb on + strand, within GFF4255 at 41.067 kb on - strand, within GFF4255 at 41.071 kb on + strand, within GFF4255 at 41.072 kb on - strand, within GFF4255 at 41.341 kb on + strand at 41.422 kb on + strand, within GFF4256 at 41.672 kb on - strand at 41.851 kb on - strand, within GFF4257 at 41.892 kb on - strand, within GFF4257 at 41.917 kb on - strand, within GFF4257 at 41.917 kb on - strand, within GFF4257 at 41.939 kb on + strand, within GFF4257 at 41.939 kb on + strand, within GFF4257 at 41.940 kb on - strand, within GFF4257 at 41.940 kb on - strand, within GFF4257 at 41.947 kb on + strand, within GFF4257 at 41.948 kb on - strand, within GFF4257 at 41.980 kb on + strand, within GFF4257 at 41.981 kb on - strand, within GFF4257 at 41.981 kb on - strand, within GFF4257 at 41.981 kb on - strand, within GFF4257 at 41.982 kb on + strand, within GFF4257 at 41.982 kb on + strand, within GFF4257 at 41.983 kb on - strand, within GFF4257 at 42.004 kb on - strand, within GFF4257 at 42.142 kb on + strand, within GFF4257 at 42.299 kb on + strand, within GFF4257 at 42.334 kb on + strand, within GFF4257
Per-strain Table
Position Strand Gene LocusTag Fraction C.elegans, mixed culture-1 remove 40,411 - -0.4 40,435 + -0.4 40,435 + +0.2 40,435 + +1.0 40,435 + +0.4 40,436 - +0.3 40,436 - +0.1 40,436 - -0.4 40,603 + GFF4255 0.22 -0.2 40,604 - GFF4255 0.22 +0.4 40,660 - GFF4255 0.28 +0.3 40,660 - GFF4255 0.28 +0.0 40,888 + GFF4255 0.50 +0.0 40,888 + GFF4255 0.50 -0.5 41,067 - GFF4255 0.68 +0.1 41,071 + GFF4255 0.69 +0.9 41,072 - GFF4255 0.69 -1.7 41,341 + +0.8 41,422 + GFF4256 0.26 -0.8 41,672 - +0.2 41,851 - GFF4257 0.13 +0.2 41,892 - GFF4257 0.17 -0.6 41,917 - GFF4257 0.19 +0.1 41,917 - GFF4257 0.19 +0.4 41,939 + GFF4257 0.21 -0.1 41,939 + GFF4257 0.21 +0.6 41,940 - GFF4257 0.21 -0.4 41,940 - GFF4257 0.21 -0.1 41,947 + GFF4257 0.22 +0.4 41,948 - GFF4257 0.22 -0.1 41,980 + GFF4257 0.25 -0.0 41,981 - GFF4257 0.25 +0.5 41,981 - GFF4257 0.25 +0.1 41,981 - GFF4257 0.25 -0.4 41,982 + GFF4257 0.26 +0.7 41,982 + GFF4257 0.26 +0.1 41,983 - GFF4257 0.26 +0.3 42,004 - GFF4257 0.28 +0.8 42,142 + GFF4257 0.41 -0.0 42,299 + GFF4257 0.57 +0.3 42,334 + GFF4257 0.61 +0.3
Or see this region's nucleotide sequence