Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4062
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 23,318 | + | GFF4060 | 0.46 | -1.0 | |
| 23,663 | - | GFF4061 | 0.15 | -1.8 | |
| 24,269 | + | GFF4062 | 0.37 | +0.8 | |
| 24,270 | - | GFF4062 | 0.37 | +0.2 | |
| 24,270 | - | GFF4062 | 0.37 | +0.8 | |
| 24,302 | + | GFF4062 | 0.44 | +0.4 | |
| 24,829 | - | GFF4063 | 0.29 | +0.3 | |
| 25,156 | - | -0.7 | |||
| 25,322 | + | GFF4064 | 0.10 | +1.1 | |
| 25,327 | + | GFF4064 | 0.11 | +0.1 |
Or see this region's nucleotide sequence