Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4060
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 22,483 | + | GFF4058 | 0.37 | +0.4 | |
| 22,483 | + | GFF4058 | 0.37 | +0.0 | |
| 22,950 | + | -0.3 | |||
| 22,997 | + | -0.8 | |||
| 23,044 | - | +0.2 | |||
| 23,065 | + | +0.5 | |||
| 23,318 | + | GFF4060 | 0.46 | -1.0 | |
| 23,663 | - | GFF4061 | 0.15 | -1.8 | |
| 24,269 | + | GFF4062 | 0.37 | +0.8 | |
| 24,270 | - | GFF4062 | 0.37 | +0.2 | |
| 24,270 | - | GFF4062 | 0.37 | +0.8 | |
| 24,302 | + | GFF4062 | 0.44 | +0.4 |
Or see this region's nucleotide sequence