Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3916

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
196,771	-		GFF3915	0.33	+0.6
196,903	-		GFF3915	0.48	-0.0
197,235	-		GFF3915	0.84	+0.0
197,363	-				-0.5
197,570	+				+0.8
197,571	-				+0.8
197,571	-				+0.4
197,574	+				+0.9
197,575	-				+0.6
197,682	+				+0.8
197,738	+				+0.5
197,738	+				-0.1
197,755	+				-0.0
197,755	+				-0.0
197,755	+				+0.3
197,755	+				+0.5
197,756	-				-0.3
197,819	+		GFF3916	0.11	+0.3
197,920	+		GFF3916	0.19	+0.7
197,921	-		GFF3916	0.19	+0.1
197,984	-		GFF3916	0.23	+0.4
198,099	+		GFF3916	0.32	+0.0
198,146	+		GFF3916	0.35	+0.7
198,604	+		GFF3916	0.69	+0.5
198,720	+		GFF3916	0.77	-0.1
198,778	-		GFF3916	0.82	+0.7
199,366	-		GFF3917	0.14	-0.1
199,402	-		GFF3917	0.17	-0.4
199,677	+		GFF3917	0.36	-0.7
199,678	-		GFF3917	0.36	-0.2