Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3855

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
128,827	+		GFF3854	0.84	+0.3
128,827	+		GFF3854	0.84	-1.1
128,827	+		GFF3854	0.84	+0.3
128,828	-		GFF3854	0.84	-0.0
128,828	-		GFF3854	0.84	-0.2
128,840	-		GFF3854	0.84	+0.3
129,156	+				-0.9
129,157	-				-1.0
129,319	+				+0.7
129,857	+		GFF3855	0.43	+0.0
129,981	-		GFF3855	0.53	-0.4
130,161	-		GFF3855	0.67	-0.4
130,314	-		GFF3855	0.79	-0.4
130,522	-				-0.4
130,617	+				+1.1
130,655	+				-0.9
130,839	-				-0.3
130,871	-				+0.4
130,879	+				+0.3
130,879	+				+0.4
130,906	-				-0.5
130,908	+				-0.8
131,151	+		GFF3857	0.10	+0.1
131,362	+		GFF3857	0.26	-0.4
131,461	-		GFF3857	0.33	-0.1