Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3811

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
77,440	+				+0.1
77,440	+				-1.9
77,450	+				+0.3
77,472	+				+0.2
77,473	-				+0.0
77,495	+				+0.2
77,495	+				+0.2
77,495	+				-0.8
77,496	-				+0.3
77,496	-				+0.1
77,496	-				+0.0
77,496	-				-0.2
77,546	-				-1.0
77,637	+				-0.3
77,637	+				+0.3
77,637	+				+0.9
77,637	+				+0.1
77,638	-				-0.3
77,713	+		GFF3810	0.15	-1.6
77,713	+		GFF3810	0.15	-0.6
77,714	-		GFF3810	0.15	-0.3
77,714	-		GFF3810	0.15	+0.4
77,808	+		GFF3810	0.31	-0.7
77,809	-		GFF3810	0.31	+0.7
77,809	-		GFF3810	0.31	-0.4
77,852	+		GFF3810	0.38	-0.1
78,012	+		GFF3810	0.65	+0.0
78,013	-		GFF3810	0.66	-0.3
78,051	-		GFF3810	0.72	-1.4
78,318	+				+0.4
78,320	+				+0.7
78,321	-				+0.5
78,321	-				+0.1
78,684	-		GFF3811	0.29	-1.0
78,724	+		GFF3811	0.34	+0.4
78,809	-		GFF3811	0.43	+0.5
78,854	-		GFF3811	0.48	+0.4
78,960	+		GFF3811	0.60	+0.1
78,961	-		GFF3811	0.60	-0.1
79,041	-		GFF3811	0.68	+0.5
79,169	+		GFF3811	0.83	+0.8
79,172	-		GFF3811	0.83	+0.1
79,201	+		GFF3811	0.86	+0.3
79,202	-		GFF3811	0.86	+0.2
79,619	-		GFF3812	0.14	-0.4
79,621	-		GFF3812	0.14	+0.1
79,621	-		GFF3812	0.14	+0.7
79,646	-		GFF3812	0.15	+0.0
79,656	+		GFF3812	0.16	+0.4
79,666	+		GFF3812	0.16	+0.3
80,189	-		GFF3812	0.46	+0.2
80,277	+		GFF3812	0.52	-0.2