Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3660

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
5,755	+				+1.0
5,755	+				+0.2
5,874	-		GFF3659	0.22	+0.8
6,281	+		GFF3659	0.65	-0.1
6,932	+		GFF3660	0.10	-0.2
6,980	+		GFF3660	0.12	+0.5
7,019	+		GFF3660	0.14	-0.6
7,142	-		GFF3660	0.20	-2.4
7,234	-		GFF3660	0.24	-1.3
7,234	-		GFF3660	0.24	-0.9
7,354	+		GFF3660	0.29	-0.9
7,508	-		GFF3660	0.36	-0.4
7,508	-		GFF3660	0.36	-0.3
7,645	+		GFF3660	0.42	-0.6
7,646	-		GFF3660	0.42	-2.7
7,736	-		GFF3660	0.46	-0.0
8,119	+		GFF3660	0.62	-0.6
8,139	+		GFF3660	0.63	-0.6
8,201	-		GFF3660	0.66	-0.1
8,228	+		GFF3660	0.67	-0.3
8,262	-		GFF3660	0.69	-0.2
8,344	-		GFF3660	0.72	+0.0
8,375	+		GFF3660	0.74	+0.5
8,417	-		GFF3660	0.75	-1.6
8,417	-		GFF3660	0.75	-1.5
8,462	-		GFF3660	0.77	-1.0
8,619	+		GFF3660	0.84	-0.1
8,955	+				-0.2
8,980	+				+0.1
8,981	-				-0.5
8,981	-				-0.5
8,987	+				-0.6
8,988	-				-0.6
8,995	+				-0.2
8,995	+				-0.3
8,996	-				-2.5
8,996	-				-0.2
9,013	-				+0.5
9,064	-				-0.4
9,064	-				-0.3
9,076	-				-0.1
9,109	+				-0.9
9,231	-		GFF3661	0.24	+0.1
9,349	-		GFF3661	0.38	-0.1
9,413	-		GFF3661	0.46	-0.1
9,481	+		GFF3661	0.54	-0.1
9,482	-		GFF3661	0.54	-0.2
9,484	-		GFF3661	0.55	-0.7
9,543	+		GFF3661	0.62	-0.4
9,593	-		GFF3661	0.68	+0.8
9,593	-		GFF3661	0.68	+0.2
9,603	-		GFF3661	0.69	-0.7
9,943	+				+0.6