Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF362

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
80,946	+		GFF361	0.42	-0.1
80,987	+		GFF361	0.44	-0.3
80,987	+		GFF361	0.44	+0.0
80,989	+		GFF361	0.45	+0.5
81,075	+		GFF361	0.50	-0.9
81,082	-		GFF361	0.50	-0.1
81,082	-		GFF361	0.50	+0.4
81,152	+		GFF361	0.54	+0.2
81,225	+		GFF361	0.59	+0.1
81,229	-		GFF361	0.59	+0.1
81,229	-		GFF361	0.59	-0.5
81,259	+		GFF361	0.61	+1.0
81,404	-		GFF361	0.69	-0.1
81,580	+		GFF361	0.80	-0.0
81,580	+		GFF361	0.80	-1.7
81,657	+		GFF361	0.84	-0.7
81,658	-		GFF361	0.84	+0.3
81,775	-				+0.0
81,777	+				-0.5
81,807	+				+0.0
81,856	+				-0.0
81,902	-				-0.2
81,920	+				-0.0
81,920	+				-0.2
81,921	-				-0.1
81,921	-				-0.2
81,980	-				-0.0
81,980	-				-0.8
81,990	+		GFF362	0.11	-0.5
82,003	+		GFF362	0.14	-1.3
82,004	-		GFF362	0.14	-0.2
82,009	-		GFF362	0.15	-0.1
82,014	+		GFF362	0.15	-0.2
82,041	-		GFF362	0.20	+0.3
82,058	+		GFF362	0.22	-0.8
82,059	-		GFF362	0.23	+0.6
82,059	-		GFF362	0.23	+1.2
82,059	-		GFF362	0.23	-0.2
82,059	-		GFF362	0.23	-0.2
82,059	-		GFF362	0.23	+0.2
82,093	+		GFF362	0.28	+0.1
82,093	+		GFF362	0.28	+0.0
82,094	-		GFF362	0.28	-0.5
82,094	-		GFF362	0.28	+0.4
82,094	-		GFF362	0.28	-2.2
82,094	-		GFF362	0.28	-0.1
82,094	-		GFF362	0.28	+0.8
82,134	+		GFF362	0.35	-0.2
82,165	-		GFF362	0.40	+0.0
82,217	-		GFF362	0.48	-0.1
82,217	-		GFF362	0.48	-0.4
82,217	-		GFF362	0.48	-0.4
82,283	-		GFF362	0.59	-0.0
82,338	+		GFF362	0.68	+0.4
82,339	-		GFF362	0.68	-0.6
82,346	+		GFF362	0.69	-0.5
82,434	+		GFF362	0.83	+0.1
82,438	-		GFF362	0.84	-0.4
82,438	-		GFF362	0.84	-0.0
82,438	-		GFF362	0.84	-1.8
82,513	+				+0.0
82,513	+				-0.5
82,780	+				+0.4
82,781	-				-0.2
82,842	+				+1.2
82,843	-				-1.2
82,843	-				-0.7
82,843	-				-0.2
82,879	+		GFF363	0.10	+0.2
82,991	-		GFF363	0.23	+0.3
83,023	+		GFF363	0.27	-0.0
83,023	+		GFF363	0.27	-1.0
83,024	-		GFF363	0.27	+0.6
83,053	+		GFF363	0.30	+0.1
83,061	+		GFF363	0.31	+0.2
83,132	+		GFF363	0.39	-0.0
83,132	+		GFF363	0.39	+1.6
83,362	-		GFF363	0.65	+0.5
83,443	+		GFF363	0.74	+0.1
83,477	-		GFF363	0.78	-0.1
83,477	-		GFF363	0.78	-0.2
83,502	+		GFF363	0.81	-0.2
83,503	-		GFF363	0.81	-0.2
83,534	+		GFF363	0.85	-0.2
83,536	+		GFF363	0.85	+0.4
83,536	+		GFF363	0.85	+0.4
83,536	+		GFF363	0.85	-0.1