Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3581

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
337,599	+		GFF3580	0.39	+0.3
337,686	-		GFF3580	0.51	-1.0
337,922	+		GFF3580	0.84	-0.5
337,923	-		GFF3580	0.84	-1.1
337,943	-		GFF3580	0.86	-0.0
338,010	-				-1.4
338,073	-				-0.1
338,075	-				+1.9
338,075	-				+0.2
338,094	+				-0.4
338,105	+				-1.1
338,199	-				-0.3
338,589	-		GFF3581	0.58	+0.0
338,590	+		GFF3581	0.58	-0.2
338,590	+		GFF3581	0.58	+1.4
338,603	-		GFF3581	0.60	-0.2
338,646	+		GFF3581	0.67	+0.6
338,688	-		GFF3581	0.73	+0.3
338,704	-		GFF3581	0.76	+0.0
338,704	-		GFF3581	0.76	+2.2
338,791	-		GFF3581	0.89	+0.4
339,149	+				-1.7
339,733	-		GFF3582	0.31	+0.2