Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3356

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
120,146	-				+0.3
120,179	-				+1.3
120,207	-				+0.1
120,210	+				+0.4
120,211	-				+0.5
120,261	+				-0.1
120,262	-				+0.5
120,298	+				+0.7
120,401	-		GFF3354	0.24	-0.5
120,589	+		GFF3354	0.70	+0.6
120,593	-		GFF3354	0.71	+0.5
120,598	-		GFF3354	0.72	+0.5
120,598	-		GFF3354	0.72	+0.4
120,601	+		GFF3354	0.72	+0.4
120,602	-		GFF3354	0.73	+0.1
120,950	+		GFF3355	0.57	+1.3
120,986	+		GFF3355	0.66	-1.2
120,987	-		GFF3355	0.66	-0.9
121,052	+		GFF3355	0.82	+0.2
121,053	-		GFF3355	0.82	+0.0
121,064	-		GFF3355	0.85	+0.8
121,135	-				+0.1
121,140	+				+0.6
121,152	+				+0.1
121,395	+		GFF3356	0.37	+0.2
121,395	+		GFF3356	0.37	+0.5
121,395	+		GFF3356	0.37	-0.1
121,395	+		GFF3356	0.37	+0.4
121,577	+		GFF3356	0.63	+1.4
121,613	+		GFF3356	0.68	+1.7
121,614	-		GFF3356	0.69	+0.5
121,635	+		GFF3356	0.72	+0.9
121,672	+		GFF3356	0.77	+0.7
121,792	+				+0.1
121,839	+				-0.1
121,840	-				+0.6
121,840	-				-0.7
121,845	+				+0.4
121,925	+				-0.2
121,947	+				+0.3
121,956	-				+0.1
121,956	-				+0.1
121,982	+		GFF3357	0.10	+0.6
122,139	+		GFF3357	0.23	+0.6
122,140	-		GFF3357	0.23	+0.4
122,229	-		GFF3357	0.30	+0.7
122,369	+		GFF3357	0.42	+0.2
122,392	-		GFF3357	0.44	+0.7
122,433	-		GFF3357	0.47	+0.7
122,454	+		GFF3357	0.49	+0.5
122,491	-		GFF3357	0.52	-0.1
122,544	-		GFF3357	0.56	+0.8
122,709	+		GFF3357	0.70	+0.3
122,711	+		GFF3357	0.70	+0.6