Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3107

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
115,864	+		GFF3106	0.21	-0.2
115,876	+		GFF3106	0.22	+0.5
115,990	-		GFF3106	0.31	+0.8
116,045	-		GFF3106	0.36	+0.2
116,123	+		GFF3106	0.42	-0.7
116,124	-		GFF3106	0.43	+0.2
116,184	+		GFF3106	0.48	-0.1
116,211	+		GFF3106	0.50	+0.1
116,379	+		GFF3106	0.64	-0.3
116,379	+		GFF3106	0.64	+0.8
116,379	+		GFF3106	0.64	+0.4
116,379	+		GFF3106	0.64	-0.4
116,380	-		GFF3106	0.64	+0.6
116,442	+		GFF3106	0.70	+0.4
116,442	+		GFF3106	0.70	+1.1
116,443	-		GFF3106	0.70	+0.6
116,448	+		GFF3106	0.70	+0.5
116,480	-		GFF3106	0.73	-0.7
116,551	-		GFF3106	0.79	-0.4
116,572	-		GFF3106	0.81	+0.3
116,719	+				+0.1
116,719	+				-0.2
116,758	+				-1.0
116,883	+				+0.2
116,884	-				+0.1
116,884	-				-0.1
116,894	+		GFF3107	0.11	-0.7
116,895	-		GFF3107	0.11	-0.2
117,045	-		GFF3107	0.26	-0.2
117,045	-		GFF3107	0.26	-0.3
117,061	+		GFF3107	0.27	-0.9
117,061	+		GFF3107	0.27	-0.1
117,296	+		GFF3107	0.51	+0.8
117,297	-		GFF3107	0.51	-0.2
117,297	-		GFF3107	0.51	+0.0
117,301	-		GFF3107	0.52	-0.3
117,307	+		GFF3107	0.52	-0.6
117,323	+		GFF3107	0.54	-1.0
117,324	-		GFF3107	0.54	-0.2
117,358	+		GFF3107	0.58	-0.3
117,423	-		GFF3107	0.64	-0.1
117,440	+		GFF3107	0.66	-1.1
117,440	+		GFF3107	0.66	+0.2
117,440	+		GFF3107	0.66	+0.5
117,441	-		GFF3107	0.66	-0.6
117,441	-		GFF3107	0.66	-0.4
117,441	-		GFF3107	0.66	+0.8
117,457	+		GFF3107	0.68	+0.6
117,463	+		GFF3107	0.68	+0.1
117,533	-		GFF3107	0.75	+0.1
117,653	-		GFF3107	0.87	-0.5
117,659	+		GFF3107	0.88	-0.1
117,755	+				+0.8
117,780	+				-0.1
117,833	+				-0.1
117,833	+				-0.2
117,922	+		GFF3108	0.13	-0.1
118,001	-		GFF3108	0.20	-0.3
118,074	-		GFF3108	0.26	+0.9
118,078	+		GFF3108	0.27	-0.4
118,079	-		GFF3108	0.27	+0.9
118,276	-		GFF3108	0.44	-0.0
118,286	-		GFF3108	0.45	+0.3
118,512	+		GFF3108	0.66	-0.9
118,513	-		GFF3108	0.66	-0.4
118,588	+		GFF3108	0.72	+1.9
118,588	+		GFF3108	0.72	-0.4
118,641	+		GFF3108	0.77	+0.8