Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF3009

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
24,937	+		GFF3009	0.12	-0.7
24,938	-		GFF3009	0.12	-1.0
24,952	-		GFF3009	0.14	-1.4
25,176	-		GFF3009	0.31	-0.2
25,302	-		GFF3009	0.40	-0.8
25,304	-		GFF3009	0.40	+0.1
25,410	-		GFF3009	0.48	-0.0
25,412	-		GFF3009	0.48	-0.1
25,902	-		GFF3009	0.86	+0.2
25,909	-		GFF3009	0.86	-0.4
25,976	-				-1.0
26,117	+				-0.7
26,122	+				-0.6
26,122	+				+0.3
26,134	-				-0.2
26,183	-		GFF3010	0.12	-1.0
26,204	+		GFF3010	0.15	-0.9
26,205	-		GFF3010	0.15	+0.4
26,205	-		GFF3010	0.15	+1.8
26,262	-		GFF3010	0.25	+0.0
26,277	+		GFF3010	0.28	-2.1
26,281	-		GFF3010	0.28	+0.6
26,331	+		GFF3010	0.37	-0.3
26,667	-				-0.8
26,688	+				-0.3
26,689	-				-0.0
26,689	-				+0.1
26,689	-				-0.1
26,689	-				+0.1
26,694	+				-0.2
26,694	+				-0.3
26,695	-				+0.0
26,695	-				+0.2
26,719	+				+0.0
26,719	+				-1.3
26,720	-				+0.5
26,729	-				-0.4
26,787	-				-0.1
26,790	+				+0.8
26,793	-				+0.2
26,889	+				-0.3