Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2918

Experiment: C.elegans, mixed culture-1

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntGFF2916 and GFF2917 overlap by 8 nucleotidesGFF2917 and GFF2918 overlap by 48 nucleotidesGFF2918 and GFF2919 are separated by 23 nucleotides GFF2916 - Phosphoglucosamine mutase (EC 5.4.2.10), at 3,883 to 5,220 GFF2916 GFF2917 - Dihydropteroate synthase (EC 2.5.1.15), at 5,213 to 6,061 GFF2917 GFF2918 - hypothetical protein, at 6,014 to 6,142 GFF2918 GFF2919 - Cell division protein FtsH (EC 3.4.24.-), at 6,166 to 8,100 GFF2919 Position (kb) 6 7Strain fitness (log2 ratio) -1 0 1at 6.084 kb on - strand, within GFF2918

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Per-strain Table

Position Strand Gene LocusTag Fraction C.elegans, mixed culture-1
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6,084 - GFF2918 0.54 -0.3

Or see this region's nucleotide sequence