Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2896

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
21,466	-				-0.0
21,554	-				+0.2
21,554	-				+0.5
21,624	+				-0.1
21,722	-				+0.1
21,847	+				+0.2
21,900	+				+0.2
21,900	+				+0.3
21,900	+				+0.1
21,900	+				-0.1
21,900	+				-0.6
21,900	+				+0.0
21,901	-				+0.0
21,902	+				+1.0
21,903	-				+0.2
21,992	-				+0.2
22,158	+		GFF2895	0.68	-0.2
22,334	+				+0.6
22,336	+				+0.5
22,337	-				+1.2
22,337	-				+0.3
22,392	-				+0.3
22,396	-				+0.5
22,396	-				-0.0
22,415	+				+0.5
22,549	+		GFF2896	0.14	+1.2
22,559	-		GFF2896	0.15	+1.6
22,578	-		GFF2896	0.16	+0.1
22,652	-		GFF2896	0.21	+0.5
22,688	+		GFF2896	0.24	-0.3
22,689	-		GFF2896	0.24	-0.3
22,754	-		GFF2896	0.28	-1.7
23,321	-		GFF2896	0.67	+0.8
23,382	-		GFF2896	0.71	+0.7
23,508	+		GFF2896	0.79	+0.4
23,509	-		GFF2896	0.79	+0.2
23,620	+		GFF2896	0.87	-0.1
23,627	+		GFF2896	0.87	+0.3
23,760	-				+0.2
23,795	+				+0.1
23,796	-				-0.8
23,799	-				-0.9
23,803	+				+0.3
23,804	-				+0.5
23,822	-				-0.0
23,822	-				+0.6
23,848	-				+0.4
23,869	+				-0.8
23,893	-				-0.6
23,893	-				+0.8
23,947	+				+0.3
24,258	+		GFF2897	0.32	-0.6
24,283	+		GFF2897	0.34	+0.5
24,635	-		GFF2897	0.74	+0.1