Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2765
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 290,864 | - | GFF2764 | 0.73 | -0.3 | |
| 290,864 | - | GFF2764 | 0.73 | -0.3 | |
| 291,300 | - | +0.5 | |||
| 291,335 | + | +0.1 | |||
| 291,585 | + | GFF2765 | 0.38 | +0.0 | |
| 291,656 | - | GFF2765 | 0.49 | -0.0 | |
| 291,728 | + | GFF2765 | 0.60 | +0.0 | |
| 291,728 | + | GFF2765 | 0.60 | +0.7 | |
| 291,825 | + | GFF2765 | 0.75 | +0.1 | |
| 291,919 | - | GFF2765 | 0.89 | +1.4 | |
| 291,992 | + | +0.2 | |||
| 291,992 | + | +0.1 | |||
| 292,479 | + | GFF2766 | 0.34 | -0.4 | |
| 292,480 | - | GFF2766 | 0.34 | +0.0 | |
| 292,555 | + | GFF2766 | 0.40 | +0.2 | |
| 292,565 | + | GFF2766 | 0.40 | +0.2 | |
| 292,583 | - | GFF2766 | 0.42 | -0.8 | |
| 292,679 | + | GFF2766 | 0.48 | +0.7 | |
| 292,735 | + | GFF2766 | 0.52 | +0.2 | |
| 292,779 | - | GFF2766 | 0.55 | -0.1 | |
| 292,799 | + | GFF2766 | 0.57 | +0.4 | |
| 292,862 | + | GFF2766 | 0.61 | -0.1 | |
| 292,873 | - | GFF2766 | 0.62 | +0.0 | |
| 292,976 | + | GFF2766 | 0.69 | +0.1 |
Or see this region's nucleotide sequence