Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2695
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
|---|---|---|---|---|---|
| remove | |||||
| 214,918 | - | GFF2694 | 0.34 | +0.3 | |
| 214,950 | + | GFF2694 | 0.40 | -0.1 | |
| 215,013 | + | GFF2694 | 0.50 | +0.0 | |
| 215,014 | - | GFF2694 | 0.50 | -0.6 | |
| 215,014 | - | GFF2694 | 0.50 | -0.2 | |
| 215,026 | - | GFF2694 | 0.52 | -1.9 | |
| 215,410 | + | +0.6 | |||
| 215,483 | + | -0.8 | |||
| 215,574 | + | +0.4 | |||
| 215,575 | - | -0.1 | |||
| 216,171 | - | GFF2695 | 0.40 | -0.0 | |
| 216,623 | + | GFF2695 | 0.87 | -0.2 | |
| 216,627 | - | GFF2695 | 0.87 | -0.2 | |
| 216,627 | - | GFF2695 | 0.87 | -0.8 | |
| 217,192 | + | -0.3 | |||
| 217,334 | + | +0.1 | |||
| 217,406 | + | +0.2 | |||
| 217,438 | - | -0.3 | |||
| 217,438 | - | +0.1 | |||
| 217,495 | - | +0.1 |
Or see this region's nucleotide sequence