Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2439

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
53,839	+				+1.3
53,934	-				+0.3
53,992	-		GFF2439	0.14	+0.4
54,138	-		GFF2439	0.31	+0.5
54,138	-		GFF2439	0.31	-0.0
54,279	+		GFF2439	0.47	+0.9
54,279	+		GFF2439	0.47	-0.1
54,280	-		GFF2439	0.47	+0.5
54,760	-				+0.4
54,762	-				+0.1
55,150	+		GFF2440	0.21	-0.1
55,227	+		GFF2440	0.29	+0.8
55,250	-		GFF2440	0.31	-0.3
55,252	-		GFF2440	0.31	-0.9
55,252	-		GFF2440	0.31	+0.3
55,663	+		GFF2440	0.70	+0.5
55,663	+		GFF2440	0.70	+0.3
55,664	-		GFF2440	0.70	+0.0
55,664	-		GFF2440	0.70	+0.0
55,685	-		GFF2440	0.73	-0.1