Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF2102

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
10,010	+				+0.2
10,106	+				-0.0
10,309	+				-0.2
10,309	+				-0.2
10,309	+				+0.3
10,309	+				-0.0
10,310	-				-0.8
10,311	+				-0.1
10,312	-				-0.0
10,372	-				-0.4
10,406	+				+1.0
10,415	+				-0.4
10,418	+				-1.3
10,890	+				-0.1
10,894	+				-0.1
10,987	+		GFF2102	0.25	-1.1
10,987	+		GFF2102	0.25	+0.3
10,987	+		GFF2102	0.25	-0.6
10,988	-		GFF2102	0.25	-0.0
10,990	-		GFF2102	0.26	-0.0
11,040	+		GFF2102	0.34	+0.3
11,040	+		GFF2102	0.34	+0.4
11,183	+		GFF2102	0.58	-0.2
11,183	+		GFF2102	0.58	-0.7
11,391	+				-0.3
11,392	-				+0.3
11,392	-				-1.0
11,392	-				-1.4
11,392	-				-0.2
11,411	-				-1.1
11,564	+				-0.2
11,914	+		GFF2103	0.43	+1.0
11,973	-		GFF2103	0.49	-1.2
12,079	-		GFF2103	0.61	+0.2
12,190	-		GFF2103	0.73	+0.1
12,201	+		GFF2103	0.75	+0.3
12,240	-		GFF2103	0.79	-0.1
12,267	+		GFF2103	0.82	-0.1
12,371	+				-0.4
12,375	+				+0.1
12,375	+				+0.4
12,375	+				+0.4
12,376	-				-0.5