Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1995

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
8,843	+		GFF1994	0.78	+0.4
8,877	+		GFF1994	0.80	+0.1
8,894	-		GFF1994	0.81	-0.7
8,909	+		GFF1994	0.82	+0.4
8,910	-		GFF1994	0.82	+0.3
8,948	+		GFF1994	0.85	+0.3
8,962	+		GFF1994	0.86	+0.4
8,963	-		GFF1994	0.86	+0.5
9,048	+				+0.0
9,311	-				+0.1
9,662	-		GFF1995	0.27	+1.3
10,011	-		GFF1995	0.62	-1.5
10,416	+				+0.9
10,504	-				-0.1
10,594	+				-0.1
10,595	-				-0.2
10,595	-				-0.8
10,608	+				-0.4
10,680	+				-0.2
10,681	-				+0.7
10,685	+				+2.6
10,686	-				-0.0
10,733	+				-1.0
10,733	+				+0.6
10,733	+				-3.2
10,895	-		GFF1996	0.11	-1.6
11,106	+		GFF1996	0.23	+0.8
11,115	+		GFF1996	0.23	+0.0
11,116	-		GFF1996	0.23	+0.2
11,182	-		GFF1996	0.27	+0.3
11,305	+		GFF1996	0.34	-0.2