Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1949

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
139,228	+		GFF1947	0.88	+0.2
139,340	+				-0.1
139,340	+				+0.0
139,341	-				+0.2
139,441	+		GFF1948	0.18	+0.1
139,572	+		GFF1948	0.34	+0.9
139,573	-		GFF1948	0.34	-1.0
139,583	-		GFF1948	0.36	-0.4
139,641	-		GFF1948	0.43	+0.1
139,871	-		GFF1948	0.71	+0.2
139,878	+		GFF1948	0.72	+0.1
139,879	-		GFF1948	0.72	-0.3
140,014	-		GFF1948	0.89	-0.2
140,080	-				-0.1
140,080	-				-0.2
140,110	-				+0.3
140,244	+		GFF1949	0.17	+0.3
140,301	-		GFF1949	0.24	+0.2
140,333	+		GFF1949	0.28	+1.5
140,334	-		GFF1949	0.28	+0.7
140,381	+		GFF1949	0.34	+0.3
140,524	-		GFF1949	0.51	+0.8
140,851	-				+0.1
141,135	-		GFF1950	0.19	+0.9
141,685	+		GFF1950	0.69	-0.2
141,686	-		GFF1950	0.70	-0.1
141,686	-		GFF1950	0.70	-0.2
141,851	+		GFF1950	0.85	+0.3