Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1932
Experiment: C.elegans, mixed culture-1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | C.elegans, mixed culture-1 |
---|---|---|---|---|---|
remove | |||||
125,018 | - | +0.2 | |||
126,032 | - | -1.4 | |||
126,138 | + | +0.2 | |||
126,240 | - | GFF1933 | 0.15 | -0.2 | |
126,327 | - | GFF1933 | 0.28 | -0.1 | |
126,327 | - | GFF1933 | 0.28 | -0.4 | |
126,327 | - | GFF1933 | 0.28 | -0.5 | |
126,328 | + | GFF1933 | 0.28 | +0.3 | |
126,786 | - | +0.1 | |||
126,853 | + | -0.5 |
Or see this region's nucleotide sequence