Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1927

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
119,775	+		GFF1926	0.36	-0.7
119,837	+		GFF1926	0.40	+0.2
119,837	+		GFF1926	0.40	+0.2
119,837	+		GFF1926	0.40	-0.1
119,901	+		GFF1926	0.45	+0.4
119,916	+		GFF1926	0.46	+0.6
120,282	+		GFF1926	0.71	-0.2
120,548	-				-0.2
120,560	+				-0.0
120,658	+				+0.2
120,659	-				+0.5
120,684	+				+0.2
120,685	-				+0.4
120,794	+				+0.0
120,794	+				+1.0
120,795	-				+0.9
120,831	+				-0.2
120,847	+				-0.4
120,847	+				-0.9
120,847	+				-2.0
120,847	+				-0.1
120,848	-				-0.4
120,848	-				-1.2
121,027	+		GFF1927	0.20	+0.7
121,028	-		GFF1927	0.20	-0.1
121,239	-		GFF1927	0.34	-0.8
121,244	+		GFF1927	0.34	-0.9
121,245	-		GFF1927	0.34	+0.2
121,341	-		GFF1927	0.41	-0.9
121,548	-		GFF1927	0.54	+0.6
121,548	-		GFF1927	0.54	+0.3
121,549	+		GFF1927	0.54	+0.0
121,549	+		GFF1927	0.54	-0.7
121,549	+		GFF1927	0.54	+0.9
121,550	-		GFF1927	0.54	-0.9
121,550	-		GFF1927	0.54	-0.2
121,550	-		GFF1927	0.54	-0.8
121,550	-		GFF1927	0.54	-0.5
121,550	-		GFF1927	0.54	-0.5
121,554	-		GFF1927	0.55	-1.3
121,628	+		GFF1927	0.59	-0.6
121,629	-		GFF1927	0.59	-2.2
121,630	+		GFF1927	0.60	+0.0
121,630	+		GFF1927	0.60	-1.4
121,631	-		GFF1927	0.60	-0.1
121,742	-		GFF1927	0.67	-1.7
121,787	+		GFF1927	0.70	+1.0
121,877	+		GFF1927	0.76	+0.1
121,908	-		GFF1927	0.78	+1.0
121,941	-		GFF1927	0.80	-1.0
121,971	-		GFF1927	0.82	+0.0
122,106	-				-0.6
122,123	+				+0.2
122,123	+				+0.5
122,191	+				-1.4
122,243	+				-1.5
122,244	-				-0.5
122,407	-		GFF1928	0.26	-0.5
122,407	-		GFF1928	0.26	+0.2
122,518	+		GFF1928	0.48	-0.9
122,586	+		GFF1928	0.62	-0.4
122,630	+		GFF1928	0.71	-0.7
122,636	+		GFF1928	0.73	-0.1
122,637	-		GFF1928	0.73	-0.1
122,639	+		GFF1928	0.73	-0.6
122,769	+				+1.7
122,770	-				-0.3
123,092	-				+0.1
123,094	-				-0.2
123,228	+		GFF1930	0.22	-0.2