Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1888

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
81,960	-		GFF1887	0.68	-0.3
81,974	-		GFF1887	0.70	-0.8
81,996	+		GFF1887	0.71	-1.3
81,997	-		GFF1887	0.71	-0.8
81,997	-		GFF1887	0.71	-1.4
82,036	+		GFF1887	0.74	-0.8
82,036	+		GFF1887	0.74	-0.8
82,037	-		GFF1887	0.74	-1.1
82,086	+		GFF1887	0.78	-1.5
82,653	-		GFF1888	0.55	-1.5
82,653	-		GFF1888	0.55	-1.4
82,712	+		GFF1888	0.67	-0.7
82,813	+		GFF1888	0.87	-0.7
82,814	-		GFF1888	0.87	-1.5
82,882	+				-0.2
82,901	+				-1.1
83,021	+				-1.3
83,022	-				-0.6
83,045	-				-1.0
83,047	+				-0.2
83,226	-		GFF1889	0.19	-0.5
83,293	+		GFF1889	0.23	-0.9
83,293	+		GFF1889	0.23	-0.1
83,293	+		GFF1889	0.23	-1.4
83,293	+		GFF1889	0.23	-2.5
83,294	-		GFF1889	0.23	-0.9
83,366	+		GFF1889	0.27	-1.9
83,444	-		GFF1889	0.31	-1.2
83,477	+		GFF1889	0.33	-2.3
83,824	+		GFF1889	0.52	-3.1
83,855	-		GFF1889	0.54	-0.9
83,871	-		GFF1889	0.55	-0.6