Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1845

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
35,784	-		GFF1844	0.58	+0.4
35,786	-		GFF1844	0.58	+0.4
36,130	+		GFF1844	0.83	-0.0
36,131	-		GFF1844	0.83	+0.6
36,189	+		GFF1844	0.88	+0.1
36,189	+		GFF1844	0.88	+1.0
36,347	+				-0.5
36,357	-				+0.4
36,451	-				-0.1
36,451	-				+0.1
36,456	+				+0.2
36,456	+				+0.1
36,476	+				-0.7
36,486	-				+0.1
36,582	-				-0.3
36,752	-				+0.9
36,752	-				+0.3
36,753	+				-0.1
36,907	+		GFF1845	0.17	-1.9
36,910	+		GFF1845	0.17	-0.2
37,451	+		GFF1845	0.50	+0.7
37,673	-		GFF1845	0.64	-0.1
38,154	+				+0.1
38,155	-				-0.5
38,155	-				+0.1
38,155	-				+0.3
38,155	-				+0.3
38,267	+				-0.1
38,472	+		GFF1846	0.18	+0.1
38,502	-		GFF1846	0.20	+0.4
38,531	+		GFF1846	0.23	+0.2
38,619	-		GFF1846	0.30	-0.7
38,779	+		GFF1846	0.42	+0.2
38,860	-		GFF1846	0.49	+0.1
38,878	+		GFF1846	0.50	+0.3
39,170	-		GFF1846	0.73	+0.4