Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1780

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
1,634	+				+1.0
1,658	-				+0.2
1,675	+				-0.5
1,724	+				+0.6
1,724	+				+0.0
1,725	-				+0.6
1,726	+				-0.0
1,727	-				+0.4
1,839	+				+0.0
1,882	+				+0.0
2,189	-		GFF1779	0.53	-0.4
2,192	+		GFF1779	0.53	+0.3
2,277	+		GFF1779	0.65	+0.3
2,283	+		GFF1779	0.66	+0.3
2,284	-		GFF1779	0.66	+0.5
2,284	-		GFF1779	0.66	-0.2
2,531	-				+0.5
2,534	+				+0.2
2,550	+				-0.3
2,765	+		GFF1780	0.23	+0.5
2,790	+		GFF1780	0.26	+0.8
2,922	-		GFF1780	0.41	-0.8
2,922	-		GFF1780	0.41	+0.2
2,926	-		GFF1780	0.41	+0.9
3,153	+		GFF1780	0.66	+0.3
3,153	+		GFF1780	0.66	+0.1
3,475	+				+0.5
3,476	-				-0.1
3,480	+				+0.1
3,480	+				+0.6
3,481	-				+0.1
3,483	-				+0.8
3,483	-				+0.1
3,677	-		GFF1781	0.33	+1.1
3,774	-		GFF1781	0.48	+0.6
3,791	+		GFF1781	0.50	+0.5
3,791	+		GFF1781	0.50	+0.7
4,257	+		GFF1782	0.13	-0.1
4,354	+		GFF1782	0.21	+0.9
4,355	-		GFF1782	0.21	-0.5