Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1773

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
78,105	+		GFF1772	0.64	+0.6
78,118	-		GFF1772	0.64	+0.2
78,334	+		GFF1772	0.73	+0.1
78,334	+		GFF1772	0.73	-0.1
78,366	-		GFF1772	0.74	+0.2
78,366	-		GFF1772	0.74	-1.2
78,552	-		GFF1772	0.81	+0.1
78,552	-		GFF1772	0.81	+0.2
78,552	-		GFF1772	0.81	+0.1
78,620	-		GFF1772	0.84	+0.5
78,648	+		GFF1772	0.85	+0.0
78,846	+				+0.4
78,851	+				+0.0
78,852	-				-0.2
78,854	+				-0.3
78,871	-				-0.1
78,871	-				+0.1
78,904	-				+0.2
78,928	+				+0.3
78,940	-				+0.5
78,994	+				-0.2
78,994	+				-1.1
79,027	+				-0.3
79,056	-				+0.0
79,065	+				+0.4
79,066	-				-1.3
79,068	-				+0.1
79,068	-				-0.3
79,068	-				+0.3
79,119	+		GFF1773	0.15	+2.6
79,120	-		GFF1773	0.15	-0.1
79,916	+				+0.3
79,928	+				-0.7
80,093	+		GFF1774	0.18	-0.5
80,231	+		GFF1774	0.28	+1.2
80,369	-		GFF1774	0.37	-0.1
80,410	-		GFF1774	0.40	+0.0
80,423	+		GFF1774	0.41	+0.3