Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1768

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
72,354	+		GFF1767	0.63	+0.1
72,379	-		GFF1767	0.64	+1.4
72,388	-		GFF1767	0.65	-0.1
72,388	-		GFF1767	0.65	-0.5
72,419	+		GFF1767	0.66	-0.1
72,420	-		GFF1767	0.66	+0.6
72,478	+		GFF1767	0.68	-0.2
72,581	-		GFF1767	0.72	+1.5
72,678	-		GFF1767	0.75	+0.1
72,726	+		GFF1767	0.77	+1.1
72,727	-		GFF1767	0.77	-0.1
72,906	-		GFF1767	0.84	+0.1
72,967	-		GFF1767	0.86	-0.7
73,390	+		GFF1768	0.54	+1.0
73,515	+				+0.5
73,518	-				+0.0
73,547	+				+0.2
73,547	+				+0.4
73,629	-		GFF1769	0.15	+0.0
73,652	-		GFF1769	0.18	+0.2
73,652	-		GFF1769	0.18	+0.5
73,813	-		GFF1769	0.33	-0.4
73,840	+		GFF1769	0.36	+0.4
73,841	-		GFF1769	0.36	+0.3
73,880	+		GFF1769	0.40	+0.2
73,934	-		GFF1769	0.45	+0.3
74,055	+		GFF1769	0.56	+0.5
74,211	+		GFF1769	0.71	+0.0
74,358	-		GFF1769	0.85	-0.2
74,358	-		GFF1769	0.85	+0.6
74,413	-				+0.2