Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1716

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
15,197	-				+0.1
15,241	+				+0.3
15,241	+				+0.5
15,242	-				-0.4
15,242	-				+0.3
15,351	+		GFF1715	0.27	+0.1
15,477	+		GFF1715	0.56	+0.3
15,513	-		GFF1715	0.64	+0.1
15,513	-		GFF1715	0.64	-0.4
15,993	+				-0.4
16,048	+				-1.4
16,132	+				-2.2
16,165	+				-2.1
16,359	+		GFF1716	0.16	-3.6
16,360	-		GFF1716	0.16	-2.1
16,559	+		GFF1716	0.27	-1.8
16,559	+		GFF1716	0.27	-0.1
16,664	-		GFF1716	0.32	-2.9
16,789	+		GFF1716	0.39	-3.0
16,790	-		GFF1716	0.39	+0.8
16,820	-		GFF1716	0.41	-2.1
16,845	-		GFF1716	0.42	-0.5
16,845	-		GFF1716	0.42	-0.8
16,921	+		GFF1716	0.46	-1.8
16,974	-		GFF1716	0.49	-3.8
16,984	+		GFF1716	0.49	-2.0
16,984	+		GFF1716	0.49	-1.6
17,042	-		GFF1716	0.52	-3.1
17,338	+		GFF1716	0.68	-2.5
17,610	-		GFF1716	0.82	-4.5
17,702	+		GFF1716	0.87	-3.0
17,739	+		GFF1716	0.89	-2.2
17,739	+		GFF1716	0.89	-2.1
17,753	-				-4.1
17,753	-				-3.4
17,753	-				-1.8
17,830	+				-1.6
17,830	+				-3.2
17,831	-				-2.2
17,920	+				+0.1
17,920	+				+0.0
17,921	-				-0.2
17,921	-				-0.5
17,921	-				+0.2
17,948	+				-0.5
17,949	-				-0.3
18,122	+		GFF1717	0.12	-0.7
18,130	+		GFF1717	0.14	-0.8
18,130	+		GFF1717	0.14	-0.5
18,155	+		GFF1717	0.18	+0.0
18,155	+		GFF1717	0.18	-2.8
18,155	+		GFF1717	0.18	-1.4
18,156	-		GFF1717	0.18	-0.6
18,216	+		GFF1717	0.28	+0.1
18,482	-		GFF1717	0.70	+0.2
18,584	-		GFF1717	0.87	+0.0