Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1710

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
7,505	-		GFF1708	0.83	-0.7
7,593	+		GFF1708	0.89	+0.2
7,593	+		GFF1708	0.89	+0.5
7,594	-		GFF1708	0.89	+0.1
7,605	-				-0.2
7,720	+				-0.6
8,027	+		GFF1709	0.63	-1.1
8,028	-		GFF1709	0.64	+1.3
8,115	-		GFF1709	0.84	+0.0
8,121	-		GFF1709	0.86	+0.1
8,163	+				-1.8
8,163	+				+0.4
8,222	-				-0.1
8,240	-				+0.1
8,307	+				-0.7
8,322	+				-1.1
8,394	+				-2.0
8,399	-				-0.1
8,496	-				-0.8
8,535	+				+0.1
8,565	+		GFF1710	0.10	+0.1
8,565	+		GFF1710	0.10	+0.5
8,566	-		GFF1710	0.10	-0.5
8,566	-		GFF1710	0.10	-1.0
8,689	-		GFF1710	0.17	-0.3
8,696	+		GFF1710	0.17	+0.0
8,696	+		GFF1710	0.17	+0.5
8,773	+		GFF1710	0.21	-1.4
8,810	+		GFF1710	0.23	+0.1
8,810	+		GFF1710	0.23	-0.3
8,810	+		GFF1710	0.23	-0.0
8,810	+		GFF1710	0.23	-0.6
8,811	-		GFF1710	0.23	-0.0
8,811	-		GFF1710	0.23	-0.0
8,811	-		GFF1710	0.23	-0.2
8,811	-		GFF1710	0.23	-0.5
8,811	-		GFF1710	0.23	-0.8
8,811	-		GFF1710	0.23	+0.2
8,813	-		GFF1710	0.23	-1.4
8,895	+		GFF1710	0.28	+0.1
8,994	+		GFF1710	0.33	+0.4
9,063	-		GFF1710	0.37	-0.4
9,085	-		GFF1710	0.38	+0.2
9,108	+		GFF1710	0.39	-0.3
9,147	-		GFF1710	0.41	-0.1
9,206	+		GFF1710	0.44	+0.5
9,207	-		GFF1710	0.44	-0.6
9,233	+		GFF1710	0.46	-0.5
9,234	-		GFF1710	0.46	-0.5
9,262	-		GFF1710	0.47	-0.4
9,268	-		GFF1710	0.48	-0.2
9,287	+		GFF1710	0.49	-1.7
9,444	+		GFF1710	0.57	+0.0
9,445	-		GFF1710	0.57	-0.0
9,445	-		GFF1710	0.57	+0.4
9,448	+		GFF1710	0.57	+1.0
9,551	+		GFF1710	0.63	-1.7
9,552	-		GFF1710	0.63	-0.4
9,601	-		GFF1710	0.65	-0.2
9,616	-		GFF1710	0.66	-1.8
9,661	+		GFF1710	0.69	-0.0
9,662	-		GFF1710	0.69	+0.1
9,684	+		GFF1710	0.70	-0.2
9,751	+		GFF1710	0.74	-0.4
9,752	-		GFF1710	0.74	-0.3
9,937	-		GFF1710	0.83	-0.5
9,940	+		GFF1710	0.84	-0.6
9,941	-		GFF1710	0.84	-0.2
9,966	+		GFF1710	0.85	-0.1
9,967	-		GFF1710	0.85	-0.3
10,043	+		GFF1710	0.89	-0.3
10,156	-				+0.6
10,157	+				-0.8
10,158	-				-0.4
10,198	-				-0.6
10,198	-				-0.1
10,262	+				-0.3
10,264	+				+0.2
10,386	-				-0.2
10,387	+				-0.3
10,388	-				-0.3
10,388	-				-1.4
10,388	-				+0.0
10,388	-				+0.1
10,388	-				-0.2
10,391	+				-0.4
10,392	-				+0.0
10,406	+				-0.2
10,446	+				-0.2
10,481	+				+0.1
10,521	+				+0.1
10,544	+				-0.4
10,545	-				-0.7
10,556	+				-0.5
10,557	-				+0.2
10,667	+				-0.1
10,668	-				-0.2
10,668	-				+0.4
10,690	+				+0.6
10,958	+		GFF1711	0.24	-0.3
11,226	+		GFF1711	0.42	+0.7