Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1704

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
1,340	+		GFF1703	0.31	-0.4
1,374	-		GFF1703	0.33	-0.7
1,414	-		GFF1703	0.36	-0.4
1,416	+		GFF1703	0.36	+0.4
1,444	+		GFF1703	0.38	-0.6
1,445	-		GFF1703	0.38	+0.0
1,445	-		GFF1703	0.38	+0.3
1,445	-		GFF1703	0.38	+0.1
1,445	-		GFF1703	0.38	-0.3
1,457	-		GFF1703	0.39	-0.1
1,457	-		GFF1703	0.39	-0.2
1,457	-		GFF1703	0.39	+0.4
1,457	-		GFF1703	0.39	+0.1
1,459	-		GFF1703	0.39	-0.2
1,609	-		GFF1703	0.49	+0.0
1,619	+		GFF1703	0.50	-0.2
1,664	+		GFF1703	0.53	-0.5
1,665	-		GFF1703	0.53	+0.4
1,836	+		GFF1703	0.65	-1.1
1,837	-		GFF1703	0.65	+0.6
1,837	-		GFF1703	0.65	-0.0
1,837	-		GFF1703	0.65	-0.3
1,856	+		GFF1703	0.67	+0.0
1,868	+		GFF1703	0.68	-1.2
1,868	+		GFF1703	0.68	-0.6
1,915	-		GFF1703	0.71	+0.2
1,915	-		GFF1703	0.71	-0.0
1,917	-		GFF1703	0.71	-0.3
1,986	-		GFF1703	0.76	+1.1
2,031	+		GFF1703	0.79	+0.8
2,148	+		GFF1703	0.87	+0.1
2,148	+		GFF1703	0.87	-0.1
2,148	+		GFF1703	0.87	-0.0
2,153	-		GFF1703	0.87	+0.1
2,195	-				-0.2
2,195	-				+0.1
2,195	-				-0.1
2,196	+				-0.1
2,196	+				-0.5
2,197	-				-0.1
2,197	-				-0.3
2,197	-				-0.2
2,244	+				+0.2
2,252	+				+0.4
2,253	-				+0.3
2,293	-				-0.2
2,484	-		GFF1704	0.19	+0.0
2,520	-		GFF1704	0.23	-0.6
2,650	-		GFF1704	0.36	-0.1
2,650	-		GFF1704	0.36	+0.5
2,744	-		GFF1704	0.45	-1.1
2,744	-		GFF1704	0.45	+0.0
2,778	+		GFF1704	0.49	-0.4
2,812	+		GFF1704	0.52	-0.4
2,813	-		GFF1704	0.52	-0.4
2,878	+		GFF1704	0.59	-0.5
3,025	+		GFF1704	0.74	+0.1
3,075	+		GFF1704	0.79	+0.9
3,102	-		GFF1704	0.81	-0.4
3,102	-		GFF1704	0.81	-0.3
3,102	-		GFF1704	0.81	-0.5
3,102	-		GFF1704	0.81	-0.8
3,128	+		GFF1704	0.84	-0.2
3,162	+		GFF1704	0.87	+0.1
3,286	+				-0.5
3,286	+				-0.9
3,287	-				+0.1
3,289	+				-0.3
3,463	+		GFF1705	0.18	-0.4
3,530	+		GFF1705	0.25	-0.3
3,563	-		GFF1705	0.28	-0.8
3,745	+		GFF1705	0.48	-0.9
3,746	-		GFF1705	0.48	-0.1
3,746	-		GFF1705	0.48	+0.5
3,746	-		GFF1705	0.48	-0.6
3,748	+		GFF1705	0.48	-0.2
3,748	+		GFF1705	0.48	-0.6
3,749	-		GFF1705	0.48	-0.4
3,749	-		GFF1705	0.48	-0.4
3,959	-		GFF1705	0.71	+0.4
3,959	-		GFF1705	0.71	-0.2
3,967	+		GFF1705	0.72	-0.6
3,968	-		GFF1705	0.72	+0.5
3,968	-		GFF1705	0.72	+0.3
4,006	+		GFF1705	0.76	-1.6
4,013	-		GFF1705	0.77	+0.1
4,058	-		GFF1705	0.82	-0.3
4,070	-		GFF1705	0.83	+0.2
4,070	-		GFF1705	0.83	-0.3
4,172	-				+0.5
4,177	+				-0.4