Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1274

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
879	+				-0.4
945	+				-2.7
981	-				-0.8
1,013	+				+0.1
1,132	+		GFF1272	0.35	+0.2
1,133	-		GFF1272	0.35	-0.1
1,134	+		GFF1272	0.36	-0.2
1,134	+		GFF1272	0.36	-0.3
1,134	+		GFF1272	0.36	+0.1
1,195	+		GFF1272	0.54	+0.1
1,196	-		GFF1272	0.54	-0.8
1,304	+		GFF1272	0.86	-0.1
1,476	+		GFF1273	0.33	-0.2
1,566	+		GFF1273	0.53	-0.0
1,616	-		GFF1273	0.63	+1.3
1,638	-		GFF1273	0.68	-0.9
1,665	-		GFF1273	0.74	-0.0
1,888	-		GFF1274	0.22	+0.2
1,899	-		GFF1274	0.25	+0.8
1,904	+		GFF1274	0.26	-0.1
2,022	-		GFF1274	0.51	+1.7
2,221	-				-0.9
2,284	+				+0.4
2,339	+				+0.4
2,369	+				-0.1
2,547	+		GFF1275	0.14	+1.4
2,548	-		GFF1275	0.14	-1.0
2,561	-		GFF1275	0.17	+0.5
2,574	-		GFF1275	0.21	+1.1
2,574	-		GFF1275	0.21	-0.1
2,673	-		GFF1275	0.45	-0.3
2,673	-		GFF1275	0.45	-1.9
2,736	+		GFF1275	0.61	-0.1
2,737	-		GFF1275	0.61	+0.9
2,738	+		GFF1275	0.61	+1.0
2,739	-		GFF1275	0.62	-0.4
2,739	-		GFF1275	0.62	-0.5
2,743	-		GFF1275	0.63	-0.4
2,896	+				-0.5