Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF1043

Experiment: C.elegans, mixed culture-1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	C.elegans, mixed culture-1
223,815	-		GFF1042	0.54	-0.1
223,952	+		GFF1042	0.63	-0.4
224,053	-		GFF1042	0.70	-0.0
224,221	+		GFF1042	0.80	-0.0
224,538	+				-0.6
224,562	-				-1.0
224,652	+				+0.1
224,674	+				+0.1
224,675	-				+0.3
224,685	-				-0.3
224,695	+				-0.6
224,695	+				+0.3
224,696	-				+0.3
224,696	-				-0.2
224,924	-		GFF1043	0.18	+0.2
225,004	+		GFF1043	0.28	-0.8
225,005	-		GFF1043	0.28	-0.4
225,157	+		GFF1043	0.48	+0.6
225,184	-		GFF1043	0.51	-0.2
225,184	-		GFF1043	0.51	+0.5
225,400	-		GFF1043	0.79	+0.7
225,560	+				-1.1
225,561	-				+0.9
225,616	+				+0.2
225,653	-				-0.0
225,712	+				+1.1
225,781	+				+1.3
225,781	+				-0.2
225,781	+				-0.1
225,782	-				-1.3
225,782	-				+0.5
226,052	-		GFF1044	0.28	-0.1
226,294	-		GFF1044	0.46	-0.2
226,325	+		GFF1044	0.48	-0.3
226,514	-		GFF1044	0.63	-2.3