Strain Fitness in Escherichia coli BW25113 around b2560

Experiment: LB Aerobic with Doxycycline hyclate 0.00000625 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB Aerobic with Doxycycline hyclate 0.00000625 mM
2,694,969	+	mltF	b2558	0.74	-0.6
2,694,971	+	mltF	b2558	0.74	-1.1
2,694,976	+	mltF	b2558	0.74	-0.6
2,695,086	+	mltF	b2558	0.81	-0.5
2,695,109	+	mltF	b2558	0.83	+0.2
2,695,125	+	mltF	b2558	0.84	-1.4
2,695,138	-	mltF	b2558	0.84	-1.6
2,695,203	-	mltF	b2558	0.89	-0.2
2,695,203	-	mltF	b2558	0.89	-0.1
2,695,252	+				+0.9
2,695,252	+				+1.2
2,695,256	-				-0.5
2,695,260	-				+1.3
2,695,328	+				+0.4
2,695,365	-				-0.1
2,695,945	-				+1.5
2,695,945	-				-1.2
2,695,966	+				+0.9
2,695,966	+				+0.7
2,695,968	+				-0.7
2,695,968	+				+1.9
2,696,004	+	yfhB	b2560	0.11	+0.9
2,696,004	+	yfhB	b2560	0.11	+0.4
2,696,014	+	yfhB	b2560	0.12	+0.1
2,696,014	+	yfhB	b2560	0.12	+0.1
2,696,024	+	yfhB	b2560	0.14	-0.8
2,696,044	+	yfhB	b2560	0.17	+0.5
2,696,044	-	yfhB	b2560	0.17	-0.3
2,696,050	-	yfhB	b2560	0.18	-0.2
2,696,077	-	yfhB	b2560	0.22	+1.5
2,696,077	-	yfhB	b2560	0.22	-1.4
2,696,089	+	yfhB	b2560	0.24	-1.1
2,696,089	+	yfhB	b2560	0.24	+0.1
2,696,164	-	yfhB	b2560	0.36	-0.2
2,696,477	+	yfhB	b2560	0.85	-0.2
2,696,479	+	yfhB	b2560	0.85	+1.2
2,696,479	+	yfhB	b2560	0.85	-2.1
2,696,526	+				+0.9
2,696,543	-				+0.5
2,696,543	-				-1.1
2,696,571	+				+0.8
2,696,579	-				-0.0
2,696,582	-				-0.8
2,696,673	-				-0.3
2,696,673	-				-0.4
2,696,739	+				+0.8
2,696,828	+				-0.4
2,696,830	+				-0.0
2,696,916	-	yfhH	b2561	0.16	+0.4
2,697,042	-	yfhH	b2561	0.31	-1.7
2,697,102	+	yfhH	b2561	0.38	-0.0
2,697,162	+	yfhH	b2561	0.45	+1.3
2,697,181	+	yfhH	b2561	0.47	-0.5
2,697,290	+	yfhH	b2561	0.60	+0.2
2,697,290	+	yfhH	b2561	0.60	+2.9
2,697,290	+	yfhH	b2561	0.60	-0.1
2,697,320	-	yfhH	b2561	0.63	+0.2
2,697,326	+	yfhH	b2561	0.64	-0.4
2,697,326	+	yfhH	b2561	0.64	-0.6
2,697,334	-	yfhH	b2561	0.65	+0.3
2,697,355	+	yfhH	b2561	0.68	+0.6
2,697,446	+	yfhH	b2561	0.78	-0.9
2,697,472	-	yfhH	b2561	0.81	+0.4
2,697,514	+	yfhH	b2561	0.86	-1.7