Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF89

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
72,852	+		GFF88	0.14	+0.4
72,853	-		GFF88	0.15	-0.0
72,853	-		GFF88	0.15	+0.1
72,988	-		GFF88	0.29	+0.2
72,988	-		GFF88	0.29	-0.5
73,059	-		GFF88	0.36	-0.0
73,059	-		GFF88	0.36	-0.0
73,059	-		GFF88	0.36	-0.2
73,160	-		GFF88	0.47	+0.1
73,276	+		GFF88	0.59	+0.3
73,373	+		GFF88	0.70	+0.1
73,374	-		GFF88	0.70	+0.3
73,375	+		GFF88	0.70	-0.2
73,626	+				-0.0
73,720	-				-0.1
73,720	-				-0.5
73,792	+				+0.3
73,797	+				-0.0
74,326	+		GFF89	0.35	+0.2
74,605	+		GFF89	0.55	-0.6
74,655	+		GFF89	0.59	-0.5
74,842	+		GFF89	0.73	-0.3
74,916	+		GFF89	0.78	+0.1
74,934	+		GFF89	0.79	+0.7
75,636	-		GFF90	0.88	+1.3
75,773	-				-0.1
75,773	-				+0.5
75,796	+				+1.1
75,907	+		GFF91	0.12	+1.2
75,923	+		GFF91	0.14	-0.7
75,924	-		GFF91	0.14	-0.3
76,005	-		GFF91	0.24	-0.4
76,051	+		GFF91	0.30	+0.1
76,074	-		GFF91	0.33	+0.3