Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF668

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
22,841	-		GFF666	0.71	-0.2
22,848	+		GFF666	0.71	+0.5
22,849	-		GFF666	0.71	+0.2
22,853	-		GFF666	0.72	-0.5
22,996	-		GFF666	0.84	+1.2
23,073	+				-0.3
23,073	+				+0.5
23,144	+				-0.2
23,144	+				+0.7
23,177	-				-0.1
23,177	-				+0.1
23,189	+				-0.2
23,267	-		GFF667	0.16	+0.4
23,594	-		GFF667	0.77	+0.3
23,719	-				+0.2
23,751	-				+0.3
23,751	-				-0.3
23,772	+				-0.4
24,363	-		GFF668	0.42	+0.9
24,544	-		GFF668	0.54	+0.7
24,585	-		GFF668	0.57	-1.4
24,810	+		GFF668	0.72	-1.4
24,810	+		GFF668	0.72	+0.1
24,811	-		GFF668	0.72	-1.0
25,146	+				+0.0
25,147	-				+0.0
25,233	+				+0.0
25,233	+				-0.2
25,234	-				+0.7
25,234	-				+0.1
25,446	+		GFF669	0.26	-2.2
25,452	+		GFF669	0.27	+0.2
25,455	-		GFF669	0.27	-0.3
25,455	-		GFF669	0.27	+0.0
25,714	-		GFF669	0.82	+0.5
25,792	-				+0.2
25,850	-				+0.3
25,960	+				-0.3
25,961	-				+0.1
26,218	-		GFF670	0.28	-0.4
26,235	+		GFF670	0.29	+0.2
26,236	-		GFF670	0.29	-0.5