Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4892

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
8,657	-		GFF4891	0.56	+0.1
8,899	+		GFF4891	0.70	-0.9
9,027	+		GFF4891	0.77	+1.1
9,027	+		GFF4891	0.77	+0.1
9,030	+		GFF4891	0.77	-1.4
9,030	+		GFF4891	0.77	-3.0
9,040	+		GFF4891	0.78	-2.2
9,041	-		GFF4891	0.78	-2.1
9,283	+				-1.0
9,283	+				-1.5
9,283	+				-1.6
9,284	-				-0.3
9,326	+				-2.1
9,327	-				-4.5
9,431	-				-1.1
9,483	+				-0.9
9,581	+				-0.8
9,607	-				-0.7
9,646	-				-0.9
9,646	-				+1.5
9,829	-		GFF4892	0.29	-0.6
9,996	+		GFF4892	0.46	-1.2
10,072	+		GFF4892	0.54	-0.7
10,163	+		GFF4892	0.63	+1.3
10,417	-		GFF4892	0.89	-0.8
10,448	+				+1.0
10,530	-				-0.0
10,575	+				-1.0
10,612	+				-0.1
10,615	+				-0.8
10,615	+				+0.5
10,615	+				-0.5
10,813	+				+0.4
10,828	+				-0.2
10,840	+				-0.2
10,871	+				-0.4
11,020	-				-0.1
11,035	+				+0.3
11,060	-				+0.1
11,060	-				-0.1
11,062	+				-0.2
11,062	+				-0.5
11,063	-				-1.4
11,069	-				+0.7
11,072	+				+0.1
11,123	+		GFF4893	0.12	-0.1
11,123	+		GFF4893	0.12	-0.5
11,147	+		GFF4893	0.17	-0.1
11,147	+		GFF4893	0.17	-0.2
11,147	+		GFF4893	0.17	-0.5
11,168	+		GFF4893	0.21	-0.9
11,234	+		GFF4893	0.34	+0.0
11,268	+		GFF4893	0.41	-0.2
11,343	-		GFF4893	0.56	-0.3
11,406	+		GFF4893	0.69	-1.2
11,426	-		GFF4893	0.73	+0.2
11,502	+		GFF4893	0.88	+0.1
11,506	+		GFF4893	0.89	-0.5