Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4672
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
|---|---|---|---|---|---|
| remove | |||||
| 2,451 | - | GFF4671 | 0.58 | -0.1 | |
| 2,494 | + | GFF4671 | 0.60 | -0.5 | |
| 2,834 | - | GFF4671 | 0.77 | +1.6 | |
| 2,893 | + | GFF4671 | 0.79 | -0.1 | |
| 2,893 | + | GFF4671 | 0.79 | -0.1 | |
| 2,900 | + | GFF4671 | 0.80 | +0.0 | |
| 2,965 | + | GFF4671 | 0.83 | -0.1 | |
| 2,966 | - | GFF4671 | 0.83 | +0.8 | |
| 3,016 | + | GFF4671 | 0.86 | -0.2 | |
| 3,091 | + | GFF4671 | 0.89 | -0.4 | |
| 3,333 | + | GFF4672 | 0.13 | +0.0 | |
| 3,390 | - | GFF4672 | 0.41 | -0.9 | |
| 3,585 | + | +0.6 | |||
| 3,707 | - | GFF4673 | 0.13 | +0.5 | |
| 3,888 | - | GFF4673 | 0.24 | -0.3 | |
| 3,890 | - | GFF4673 | 0.25 | -0.3 | |
| 3,890 | - | GFF4673 | 0.25 | +1.3 | |
| 3,890 | - | GFF4673 | 0.25 | -0.1 | |
| 4,064 | - | GFF4673 | 0.36 | -1.4 | |
| 4,082 | + | GFF4673 | 0.37 | -0.2 | |
| 4,082 | + | GFF4673 | 0.37 | +0.5 | |
| 4,278 | - | GFF4673 | 0.50 | +0.4 | |
| 4,376 | + | GFF4673 | 0.56 | -0.2 |
Or see this region's nucleotide sequence