Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4653
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
444,376 | + | GFF4651 | 0.58 | -1.9 | |
444,376 | + | GFF4651 | 0.58 | -2.3 | |
444,376 | + | GFF4651 | 0.58 | -1.8 | |
444,409 | - | GFF4651 | 0.63 | -1.1 | |
444,662 | + | -1.6 | |||
444,703 | + | -3.8 | |||
444,719 | - | GFF4652 | 0.12 | -2.9 | |
444,739 | - | GFF4652 | 0.17 | -1.9 | |
444,764 | - | GFF4652 | 0.22 | -4.2 | |
444,841 | + | GFF4652 | 0.40 | -4.4 | |
444,862 | + | GFF4652 | 0.45 | -2.6 | |
444,888 | - | GFF4652 | 0.51 | -1.8 | |
444,951 | + | GFF4652 | 0.66 | -3.8 | |
445,234 | + | -1.2 | |||
445,235 | - | -1.5 | |||
445,271 | + | -1.3 | |||
445,350 | + | GFF4653 | 0.14 | -1.6 | |
446,261 | + | GFF4653 | 0.81 | -2.0 | |
446,351 | + | GFF4653 | 0.88 | -1.5 | |
446,354 | + | GFF4653 | 0.88 | -2.8 | |
446,378 | - | GFF4653 | 0.90 | -2.4 | |
446,518 | - | -0.6 | |||
446,540 | + | -0.1 | |||
446,557 | + | -0.4 | |||
446,639 | + | -1.1 | |||
447,026 | - | GFF4654 | 0.30 | -3.8 | |
447,147 | + | GFF4654 | 0.39 | -2.9 | |
447,148 | - | GFF4654 | 0.39 | -2.1 | |
447,211 | - | GFF4654 | 0.44 | -2.3 | |
447,289 | - | GFF4654 | 0.50 | -4.0 | |
447,453 | + | GFF4654 | 0.63 | -3.5 | |
447,454 | - | GFF4654 | 0.63 | -1.6 |
Or see this region's nucleotide sequence