Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4641
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
---|---|---|---|---|---|
remove | |||||
435,882 | + | GFF4640 | 0.64 | -1.8 | |
436,334 | + | -1.5 | |||
436,382 | - | -0.8 | |||
436,463 | - | -2.0 | |||
436,522 | - | -1.7 | |||
436,529 | + | -1.5 | |||
436,529 | + | -1.3 | |||
436,704 | + | GFF4641 | 0.21 | -3.1 | |
437,064 | - | GFF4641 | 0.52 | -0.8 | |
437,283 | - | GFF4641 | 0.71 | -1.1 | |
437,367 | - | GFF4641 | 0.78 | -2.0 | |
437,620 | - | -0.3 | |||
437,636 | - | -1.6 | |||
437,645 | - | -0.5 | |||
438,095 | + | GFF4642 | 0.54 | -2.1 | |
438,096 | - | GFF4642 | 0.55 | -1.7 | |
438,572 | + | GFF4643 | 0.42 | -0.3 |
Or see this region's nucleotide sequence