Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4442

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
229,228	-				+0.7
229,228	-				-0.1
229,228	-				+0.7
229,228	-				-0.3
229,228	-				+0.3
229,228	-				-0.2
229,228	-				-0.6
229,230	-				+0.1
229,230	-				-0.5
229,248	-				-0.2
229,297	-				+0.3
229,297	-				+0.3
229,297	-				+0.3
229,303	+				+0.2
230,755	-				+0.5
230,870	+		GFF4443	0.11	+0.6
230,899	-		GFF4443	0.15	-1.3
231,051	-		GFF4443	0.33	+0.3
231,051	-		GFF4443	0.33	+0.3
231,144	+		GFF4443	0.44	+0.2
231,150	-		GFF4443	0.45	+0.0
231,188	+		GFF4443	0.50	+0.4
231,193	+		GFF4443	0.50	-0.1
231,291	+		GFF4443	0.62	-0.2
231,291	+		GFF4443	0.62	-0.4
231,292	-		GFF4443	0.62	-1.9
231,292	-		GFF4443	0.62	-0.2
231,293	+		GFF4443	0.62	+0.4
231,295	+		GFF4443	0.63	+0.6
231,295	+		GFF4443	0.63	-0.4
231,410	+		GFF4443	0.77	-0.2
231,536	+				-0.3
231,537	-				-0.1