Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4416

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
200,369	-		GFF4415	0.38	-0.7
200,518	+		GFF4415	0.51	-0.6
200,545	+		GFF4415	0.54	-1.0
200,648	-		GFF4415	0.63	-0.5
200,648	-		GFF4415	0.63	+0.2
200,698	-		GFF4415	0.67	-0.1
200,880	+		GFF4415	0.83	+0.1
200,914	+		GFF4415	0.86	+0.2
200,914	+		GFF4415	0.86	+0.3
201,098	+				+0.0
201,166	+				-0.5
201,312	-				+0.2
201,423	+		GFF4416	0.12	-1.0
201,483	+		GFF4416	0.19	-0.1
201,483	+		GFF4416	0.19	-0.0
201,499	+		GFF4416	0.21	-0.6
201,550	-		GFF4416	0.27	-0.2
201,550	-		GFF4416	0.27	-0.7
201,671	+		GFF4416	0.42	-1.3
201,785	-		GFF4416	0.55	+0.1
201,793	+		GFF4416	0.56	+0.7
201,802	+		GFF4416	0.57	+0.3
201,803	-		GFF4416	0.57	-0.1
202,113	-				-0.6
202,473	+		GFF4417	0.28	+0.2
202,474	-		GFF4417	0.28	-0.2
203,083	+		GFF4417	0.88	+1.3
203,134	+				-0.0