Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4387
Experiment: Dictyostellum sp.mixed culture-2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Dictyostellum sp.mixed culture-2 |
|---|---|---|---|---|---|
| remove | |||||
| 169,837 | + | -1.5 | |||
| 169,838 | - | +0.4 | |||
| 169,892 | + | -0.1 | |||
| 169,935 | - | +1.3 | |||
| 169,937 | + | -0.9 | |||
| 169,937 | + | +0.6 | |||
| 169,969 | + | GFF4386 | 0.11 | +0.8 | |
| 170,078 | - | GFF4386 | 0.40 | -0.0 | |
| 170,168 | - | GFF4386 | 0.64 | +0.7 | |
| 170,184 | - | GFF4386 | 0.68 | +1.0 | |
| 170,437 | - | -0.0 | |||
| 170,437 | - | -2.7 | |||
| 170,449 | + | +0.9 | |||
| 170,449 | + | +0.1 | |||
| 170,449 | + | -0.0 | |||
| 170,449 | + | -0.0 | |||
| 170,450 | - | -0.4 | |||
| 170,450 | - | -0.4 | |||
| 170,727 | + | GFF4387 | 0.49 | -0.5 | |
| 170,754 | - | GFF4387 | 0.54 | -0.9 |
Or see this region's nucleotide sequence