Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4360

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
140,915	+				-0.4
141,183	+		GFF4358	0.75	-0.2
141,251	+				-0.5
141,273	+				-0.1
141,274	-				-0.1
141,336	+				-0.2
141,337	-				-0.7
141,347	+				-0.1
141,352	-				+0.4
141,354	-				-0.1
141,354	-				+0.3
141,365	-				-0.5
141,551	+		GFF4359	0.43	-0.1
141,584	+		GFF4359	0.51	+0.0
141,585	-		GFF4359	0.52	+0.5
141,632	+		GFF4359	0.63	+0.2
141,821	-				-0.2
141,836	+				+0.6
141,890	-				-0.1
142,003	-		GFF4360	0.17	-1.1
142,087	-		GFF4360	0.29	-0.3
142,099	+		GFF4360	0.31	-0.3
142,506	-		GFF4360	0.90	-0.0
142,559	-				-0.2
142,579	-				+0.2
142,579	-				-0.2
142,579	-				-0.7
142,582	+				+0.2
142,750	+				+0.7
142,917	-		GFF4361	0.16	+1.1
142,933	+		GFF4361	0.17	+0.5
143,096	+		GFF4361	0.27	-0.4
143,109	+		GFF4361	0.27	-0.3
143,201	-		GFF4361	0.33	+0.3
143,242	+		GFF4361	0.35	-1.1
143,254	+		GFF4361	0.36	+0.2
143,255	-		GFF4361	0.36	-0.1
143,255	-		GFF4361	0.36	-0.2
143,258	+		GFF4361	0.36	-0.7
143,280	-		GFF4361	0.37	-0.8
143,313	+		GFF4361	0.39	+0.1
143,333	-		GFF4361	0.41	-0.2
143,338	+		GFF4361	0.41	+0.4
143,338	+		GFF4361	0.41	-0.2
143,339	-		GFF4361	0.41	-0.1
143,339	-		GFF4361	0.41	-0.1
143,342	+		GFF4361	0.41	-0.2
143,342	+		GFF4361	0.41	+0.6
143,343	-		GFF4361	0.41	+0.0
143,484	+		GFF4361	0.49	-0.3