Strain Fitness in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 around GFF4334

Experiment: Dictyostellum sp.mixed culture-2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dictyostellum sp.mixed culture-2
114,589	-		GFF4333	0.15	+0.2
114,621	+		GFF4333	0.18	-0.3
114,622	-		GFF4333	0.18	+0.4
114,622	-		GFF4333	0.18	-0.3
114,967	+		GFF4333	0.50	+0.2
114,968	-		GFF4333	0.50	+0.5
114,979	-		GFF4333	0.51	+0.4
115,091	-		GFF4333	0.61	+0.2
115,161	-		GFF4333	0.67	+0.1
115,284	-		GFF4333	0.78	+0.1
115,362	-		GFF4333	0.85	-0.1
115,401	-		GFF4333	0.89	+0.1
115,401	-		GFF4333	0.89	-0.1
115,401	-		GFF4333	0.89	+0.2
115,404	+		GFF4333	0.89	+0.3
115,459	+				-0.3
115,459	+				+0.3
115,459	+				+0.1
115,459	+				+0.1
115,460	-				+0.3
115,509	+				-0.4
115,521	+				-0.6
115,553	+				-0.0
115,718	-		GFF4334	0.23	+0.0
115,788	+		GFF4334	0.31	+0.5
115,841	+		GFF4334	0.38	+0.1
115,895	-		GFF4334	0.45	+0.5
116,262	+				+0.1
116,306	+				+0.2
116,449	+				-1.3
116,450	-				+0.0
116,454	-				+1.4
116,454	-				-0.2
116,575	-		GFF4335	0.23	+0.1
116,679	-		GFF4335	0.41	+0.7
116,679	-		GFF4335	0.41	+0.2
116,994	-				-0.0
116,994	-				+0.2
117,117	-		GFF4336	0.15	+0.0
117,216	-		GFF4336	0.27	-0.1
117,303	+		GFF4336	0.38	-2.0
117,304	-		GFF4336	0.38	+0.4